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Title :
Paucilactobacillus hokkaidonensis LOOC260 complete genome
JobID :
7d52e3dd-145e-44ac-b9fe-4d0d441098e9
Job Status :
COMPLETE

[2024-02-07 18:03:22.030974] Job submitted.
[2024-02-07 18:03:22.162777] Job started.
[2024-02-07 18:06:56.943552] Job completed.

DFAST Quality Control　

The result of taxonomy check may not represent the true taxonomic assignment when the reference genome from closely-related species is not available.

Taxonomy check

The organism name inferred from ANI result is Paucilactobacillus hokkaidonensis (conclusive).
Download Results
Organism name strain Accession Taxonomy ID Relation to type Validated* ANI (%) Matched fragments Total fragments Status
Paucilactobacillus hokkaidonensis strain=LOOC260 GCA_000829395.1 1193095 type True 100.0 799 799 conclusive
Paucilactobacillus hokkaidonensis strain=DSM 26202 GCA_001437505.1 1193095 type True 99.9102 740 799 conclusive
Paucilactobacillus hokkaidonensis strain=JCM 18461 GCA_001311505.1 1193095 type True 99.79 745 799 conclusive
Paucilactobacillus kaifaensis strain=778-3 GCA_005405145.1 2559921 type True 80.6184 325 799 below_threshold
Paucilactobacillus wasatchensis strain=WDC04 GCA_000876205.1 1335616 type True 79.9021 308 799 below_threshold
Paucilactobacillus suebicus strain=KCTC 3549 GCA_000260395.1 152335 type True 78.3126 148 799 below_threshold
Paucilactobacillus vaccinostercus strain=DSM 20634 GCA_001436295.1 176291 type True 78.154 130 799 below_threshold

* Based on NCBI Assembly Report and ANI report. See NCBI ANI report README.

Completeness check

Completeness
99.3%
Contamination
2.5%
Download Results

Please refer to the CheckM web site for the description of reported statistics.

GTDB Taxonomy Assignment

Accession GTDB Species ANI (%) Matched fragments Total fragments Status GTDB Taxonomy ANI Circumscription Radius
GCF_000829395.1 s__Paucilactobacillus hokkaidonensis 100.0 799 799 conclusive d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Paucilactobacillus 95.0
GCF_005405145.1 s__Paucilactobacillus kaifaensis 80.5995 326 799 - d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Paucilactobacillus 95.0
GCF_000876205.1 s__Paucilactobacillus wasatchensis 79.906 309 799 - d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Paucilactobacillus 95.0
GCF_001434475.1 s__Paucilactobacillus suebicus 78.4259 152 799 - d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Paucilactobacillus 95.0
GCF_001437605.1 s__Pediococcus argentinicus 78.4147 55 799 - d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Pediococcus 95.0
GCF_001436295.1 s__Paucilactobacillus vaccinostercus 78.154 130 799 - d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Paucilactobacillus 95.0
GCF_001434315.1 s__Paucilactobacillus oligofermentans 78.1016 136 799 - d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Paucilactobacillus 95.0
GCF_005405445.1 s__Paucilactobacillus nenjiangensis 77.8131 127 799 - d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Paucilactobacillus 95.0
GCF_014635905.1 s__Limosilactobacillus caviae 77.2455 57 799 - d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Limosilactobacillus 95.0
GCF_009663775.1 s__Limosilactobacillus sp009663775 77.002 53 799 - d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Limosilactobacillus 95.0

Log

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