This pipeline internally uses NCBI VADR to annotate a viral genome sequence and generates data submission files to DDBJ.
Source code of the pipeline is available at Github: nigyta/dfast_vrl
Currently only Mpox is available.
Optional, but it is recommended to specify a unique value to distinguish the sample. For DDBJ submission, specify an isolate name like 'MPV/host/location/isolate/date'.