[Note] Representative Genome of Lactobacillus aviarius subsp. araffinosus

Genome Statistics

Total Length (bp)1,470,053
No. of Sequences26
GC Content(%)38.1%
N50168,716
Gap Ratio(%)0.005374%
No. of Proteins1,410
No. of rRNA2
No. of tRNA46
No. of CRISPRS0
Coding Ratio(%)88.5%
Genome Coverage183.6X
Completeness98.79%
Contamination0.59%

Other Info.

Type StatusType Strain
Isolation Source
Instrument ModelIllumina HiSeq 2000
Release Date2014/02/24

Download Files

Genbank Flat File :
ERR438946.gbk
GFF3-formatted File :
ERR438946.gff
Genome Fasta File :
ERR438946.genome.fna
Protein Fasta File :
ERR438946.protein.faa
CDS Fasta File :
ERR438946.cds.fna
RNA Fasta File :
ERR438946.rna.fna
Feature Table :
ERR438946.features.tsv
Genome Statistics :
ERR438946.statistics.tsv

External Link

BioProject :
PRJEB3060
NCBI / EBI
BioSample :
SAMEA2203396
NCBI / EBI
SRA :
ERR438946
DDBJ / NCBI / EBI
Taxonomy ID :
147809
NCBI / EBI
bacterio.net :
Lactobacillus aviarius subsp. araffinosus
Search at StrainInfo :
DSM 20653