Genome Statistics

Total Length (bp)1,932,017
No. of Sequences12
GC Content(%)42.1%
N50446,508
Gap Ratio(%)0.008437%
No. of Proteins1,814
No. of rRNA3
No. of tRNA52
No. of CRISPRS2
Coding Ratio(%)87.1%
Genome Coverage64.7X
Completeness99.76%
Contamination0.93%

Other Info.

Type Statusnon-type strain
Isolation Source
Instrument ModelIllumina HiSeq 2000
Release Date2015/06/05

Download Files

Genbank Flat File :
SRR1561410.gbk
GFF3-formatted File :
SRR1561410.gff
Genome Fasta File :
SRR1561410.genome.fna
Protein Fasta File :
SRR1561410.protein.faa
CDS Fasta File :
SRR1561410.cds.fna
RNA Fasta File :
SRR1561410.rna.fna
Feature Table :
SRR1561410.features.tsv
Genome Statistics :
SRR1561410.statistics.tsv

External Link

BioProject :
PRJNA222257
NCBI / EBI
BioSample :
SAMN02797809
NCBI / EBI
SRA :
SRR1561410
DDBJ / NCBI / EBI
Taxonomy ID :
1254
NCBI / EBI
bacterio.net :
Pediococcus acidilactici
Search at StrainInfo :
AS1.2696