Genome Statistics

Total Length (bp)3,237,179
No. of Sequences44
GC Content(%)44.5%
N50358,771
Gap Ratio(%)0.000185%
No. of Proteins3,034
No. of rRNA3
No. of tRNA61
No. of CRISPRS0
Coding Ratio(%)84.2%
Genome Coverage170.3X
Completeness99.35%
Contamination1.53%

Other Info.

Type Statusnon-type strain
Isolation Sourcede Man, Rogosa & Sharpe laboratory culture
Instrument ModelIllumina MiSeq
Release Date2015/06/05

Download Files

Genbank Flat File :
SRR1552616.gbk
GFF3-formatted File :
SRR1552616.gff
Genome Fasta File :
SRR1552616.genome.fna
Protein Fasta File :
SRR1552616.protein.faa
CDS Fasta File :
SRR1552616.cds.fna
RNA Fasta File :
SRR1552616.rna.fna
Feature Table :
SRR1552616.features.tsv
Genome Statistics :
SRR1552616.statistics.tsv

External Link

BioProject :
PRJNA247440
NCBI / EBI
BioSample :
SAMN02777135
NCBI / EBI
SRA :
SRR1552616
DDBJ / NCBI / EBI
Taxonomy ID :
1590
NCBI / EBI
bacterio.net :
Lactobacillus plantarum
Search at StrainInfo :
ATCC 8014