Genome Statistics

Total Length (bp)3,234,722
No. of Sequences46
GC Content(%)44.5%
N50373,566
Gap Ratio(%)6.2e-05%
No. of Proteins3,024
No. of rRNA0
No. of tRNA56
No. of CRISPRS0
Coding Ratio(%)84.2%
Genome Coverage68.1X
Completeness99.35%
Contamination1.53%

Other Info.

Type Statusnon-type strain
Isolation Sourcede Man, Rogosa & Sharpe laboratory culture
Instrument ModelIllumina MiSeq
Release Date2015/06/05

Download Files

Genbank Flat File :
SRR1552615.gbk
GFF3-formatted File :
SRR1552615.gff
Genome Fasta File :
SRR1552615.genome.fna
Protein Fasta File :
SRR1552615.protein.faa
CDS Fasta File :
SRR1552615.cds.fna
RNA Fasta File :
SRR1552615.rna.fna
Feature Table :
SRR1552615.features.tsv
Genome Statistics :
SRR1552615.statistics.tsv

External Link

BioProject :
PRJNA247441
NCBI / EBI
BioSample :
SAMN02777134
NCBI / EBI
SRA :
SRR1552615
DDBJ / NCBI / EBI
Taxonomy ID :
1590
NCBI / EBI
bacterio.net :
Lactobacillus plantarum
Search at StrainInfo :
ATCC 8014