Genome Statistics

Total Length (bp)3,236,604
No. of Sequences41
GC Content(%)44.5%
N50418,916
Gap Ratio(%)0.0%
No. of Proteins3,032
No. of rRNA3
No. of tRNA61
No. of CRISPRS0
Coding Ratio(%)84.2%
Genome Coverage156.9X
Completeness99.35%
Contamination1.53%

Other Info.

Type Statusnon-type strain
Isolation Sourcede Man, Rogosa & Sharpe laboratory culture
Instrument ModelIllumina MiSeq
Release Date2015/06/05

Download Files

Genbank Flat File :
SRR1552613.gbk
GFF3-formatted File :
SRR1552613.gff
Genome Fasta File :
SRR1552613.genome.fna
Protein Fasta File :
SRR1552613.protein.faa
CDS Fasta File :
SRR1552613.cds.fna
RNA Fasta File :
SRR1552613.rna.fna
Feature Table :
SRR1552613.features.tsv
Genome Statistics :
SRR1552613.statistics.tsv

External Link

BioProject :
PRJNA247443
NCBI / EBI
BioSample :
SAMN02777132
NCBI / EBI
SRA :
SRR1552613
DDBJ / NCBI / EBI
Taxonomy ID :
1590
NCBI / EBI
bacterio.net :
Lactobacillus plantarum
Search at StrainInfo :
ATCC 8014