Genome Statistics

Total Length (bp)3,223,842
No. of Sequences24
GC Content(%)44.5%
N50481,771
Gap Ratio(%)0.002668%
No. of Proteins3,023
No. of rRNA4
No. of tRNA63
No. of CRISPRS1
Coding Ratio(%)84.0%
Genome Coverage140.7X
Completeness99.03%
Contamination1.53%

Other Info.

Type StatusType Strain
Isolation Sourcede Man, Rogosa & Sharpe laboratory culture
Instrument ModelIllumina MiSeq
Release Date2015/06/05

Download Files

Genbank Flat File :
SRR1552612.gbk
GFF3-formatted File :
SRR1552612.gff
Genome Fasta File :
SRR1552612.genome.fna
Protein Fasta File :
SRR1552612.protein.faa
CDS Fasta File :
SRR1552612.cds.fna
RNA Fasta File :
SRR1552612.rna.fna
Feature Table :
SRR1552612.features.tsv
Genome Statistics :
SRR1552612.statistics.tsv

External Link

BioProject :
PRJNA247444
NCBI / EBI
BioSample :
SAMN02777139
NCBI / EBI
SRA :
SRR1552612
DDBJ / NCBI / EBI
Taxonomy ID :
525338
NCBI / EBI
bacterio.net :
Lactobacillus plantarum subsp. plantarum
Search at StrainInfo :
ATCC 14917