Genome Statistics

Total Length (bp)3,223,841
No. of Sequences26
GC Content(%)44.5%
N50482,021
Gap Ratio(%)0.0009%
No. of Proteins3,026
No. of rRNA4
No. of tRNA64
No. of CRISPRS0
Coding Ratio(%)84.1%
Genome Coverage145.6X
Completeness99.03%
Contamination1.53%

Other Info.

Type StatusType Strain
Isolation Sourcede Man, Rogosa & Sharpe laboratory culture
Instrument ModelIllumina MiSeq
Release Date2015/06/05

Download Files

Genbank Flat File :
SRR1552084.gbk
GFF3-formatted File :
SRR1552084.gff
Genome Fasta File :
SRR1552084.genome.fna
Protein Fasta File :
SRR1552084.protein.faa
CDS Fasta File :
SRR1552084.cds.fna
RNA Fasta File :
SRR1552084.rna.fna
Feature Table :
SRR1552084.features.tsv
Genome Statistics :
SRR1552084.statistics.tsv

External Link

BioProject :
PRJNA247439
NCBI / EBI
BioSample :
SAMN02777136
NCBI / EBI
SRA :
SRR1552084
DDBJ / NCBI / EBI
Taxonomy ID :
525338
NCBI / EBI
bacterio.net :
Lactobacillus plantarum subsp. plantarum
Search at StrainInfo :
ATCC 14917