Genome Statistics

Total Length (bp)2,632,301
No. of Sequences58
GC Content(%)39.9%
N50198,846
Gap Ratio(%)3.8e-05%
No. of Proteins2,437
No. of rRNA1
No. of tRNA48
No. of CRISPRS0
Coding Ratio(%)84.6%
Genome Coverage223.7X
Completeness99.35%
Contamination0.7%

Other Info.

Type StatusType Strain
Isolation Sourceshochu mash
Instrument ModelIllumina HiSeq 2000
Release Date2014/02/27

Download Files

Genbank Flat File :
SRR1151268.gbk
GFF3-formatted File :
SRR1151268.gff
Genome Fasta File :
SRR1151268.genome.fna
Protein Fasta File :
SRR1151268.protein.faa
CDS Fasta File :
SRR1151268.cds.fna
RNA Fasta File :
SRR1151268.rna.fna
Feature Table :
SRR1151268.features.tsv
Genome Statistics :
SRR1151268.statistics.tsv

External Link

BioProject :
PRJNA222257
NCBI / EBI
BioSample :
SAMN02369510
NCBI / EBI
SRA :
SRR1151268
DDBJ / NCBI / EBI
Taxonomy ID :
1423801
NCBI / EBI
bacterio.net :
Lactobacillus satsumensis
Search at StrainInfo :
DSM 16230