[Note] Representative Genome of Lactobacillus amylophilus

Genome Statistics

Total Length (bp)1,546,306
No. of Sequences21
GC Content(%)43.7%
N50279,787
Gap Ratio(%)0.002005%
No. of Proteins1,550
No. of rRNA0
No. of tRNA52
No. of CRISPRS1
Coding Ratio(%)88.3%
Genome Coverage536.1X
Completeness98.06%
Contamination2.18%

Other Info.

Type StatusType Strain
Isolation Sourceswine waste-corn fermentation
Instrument ModelIllumina HiSeq 2000
Release Date2014/02/27

Download Files

Genbank Flat File :
SRR1151258.gbk
GFF3-formatted File :
SRR1151258.gff
Genome Fasta File :
SRR1151258.genome.fna
Protein Fasta File :
SRR1151258.protein.faa
CDS Fasta File :
SRR1151258.cds.fna
RNA Fasta File :
SRR1151258.rna.fna
Feature Table :
SRR1151258.features.tsv
Genome Statistics :
SRR1151258.statistics.tsv

External Link

BioProject :
PRJNA222257
NCBI / EBI
BioSample :
SAMN02369500
NCBI / EBI
SRA :
SRR1151258
DDBJ / NCBI / EBI
Taxonomy ID :
1423721
NCBI / EBI
bacterio.net :
Lactobacillus amylophilus
Search at StrainInfo :
DSM 20533