Genome Statistics

Total Length (bp)3,173,311
No. of Sequences155
GC Content(%)45.0%
N5070,188
Gap Ratio(%)0.000221%
No. of Proteins2,936
No. of rRNA0
No. of tRNA56
No. of CRISPRS3
Coding Ratio(%)83.0%
Genome Coverage164.1X
Completeness99.35%
Contamination1.53%

Other Info.

Type StatusType Strain
Isolation Sourcefermented cassava roots (fufu)
Instrument ModelIllumina HiSeq 2000
Release Date2014/02/26

Download Files

Genbank Flat File :
SRR1151228.gbk
GFF3-formatted File :
SRR1151228.gff
Genome Fasta File :
SRR1151228.genome.fna
Protein Fasta File :
SRR1151228.protein.faa
CDS Fasta File :
SRR1151228.cds.fna
RNA Fasta File :
SRR1151228.rna.fna
Feature Table :
SRR1151228.features.tsv
Genome Statistics :
SRR1151228.statistics.tsv

External Link

BioProject :
PRJNA222257
NCBI / EBI
BioSample :
SAMN02369470
NCBI / EBI
SRA :
SRR1151228
DDBJ / NCBI / EBI
Taxonomy ID :
1423831
NCBI / EBI
bacterio.net :
Lactobacillus plantarum subsp. argentoratensis
Search at StrainInfo :
DSM 16365