Genome Statistics

Total Length (bp)3,117,675
No. of Sequences310
GC Content(%)47.7%
N5026,030
Gap Ratio(%)0.005389%
No. of Proteins3,037
No. of rRNA3
No. of tRNA57
No. of CRISPRS0
Coding Ratio(%)83.7%
Genome Coverage313.1X
Completeness99.19%
Contamination1.56%

Other Info.

Type StatusType Strain
Isolation Sourcecassava sour starch fermentation
Instrument ModelIllumina HiSeq 2000
Release Date2014/02/26

Download Files

Genbank Flat File :
SRR1151219.gbk
GFF3-formatted File :
SRR1151219.gff
Genome Fasta File :
SRR1151219.genome.fna
Protein Fasta File :
SRR1151219.protein.faa
CDS Fasta File :
SRR1151219.cds.fna
RNA Fasta File :
SRR1151219.rna.fna
Feature Table :
SRR1151219.features.tsv
Genome Statistics :
SRR1151219.statistics.tsv

External Link

BioProject :
PRJNA222257
NCBI / EBI
BioSample :
SAMN02369461
NCBI / EBI
SRA :
SRR1151219
DDBJ / NCBI / EBI
Taxonomy ID :
1423769
NCBI / EBI
bacterio.net :
Lactobacillus manihotivorans
Search at StrainInfo :
DSM 13343