Genome Statistics

Total Length (bp)2,230,716
No. of Sequences53
GC Content(%)37.6%
N50110,472
Gap Ratio(%)0.0%
No. of Proteins2,109
No. of rRNA2
No. of tRNA58
No. of CRISPRS1
Coding Ratio(%)85.7%
Genome Coverage361.5X
Completeness99.03%
Contamination1.34%

Other Info.

Type StatusType Strain
Isolation Sourceisolated from fermented brine used for stinky tofu production
Instrument ModelIllumina HiSeq 2000
Release Date2014/02/26

Download Files

Genbank Flat File :
SRR1151198.gbk
GFF3-formatted File :
SRR1151198.gff
Genome Fasta File :
SRR1151198.genome.fna
Protein Fasta File :
SRR1151198.protein.faa
CDS Fasta File :
SRR1151198.cds.fna
RNA Fasta File :
SRR1151198.rna.fna
Feature Table :
SRR1151198.features.tsv
Genome Statistics :
SRR1151198.statistics.tsv

External Link

BioProject :
PRJNA222257
NCBI / EBI
BioSample :
SAMN02369440
NCBI / EBI
SRA :
SRR1151198
DDBJ / NCBI / EBI
Taxonomy ID :
1423731
NCBI / EBI
bacterio.net :
Lactobacillus capillatus
Search at StrainInfo :
DSM 19910