[Note] Representative Genome of Lactobacillus cacaonum

Genome Statistics

Total Length (bp)1,917,961
No. of Sequences15
GC Content(%)33.9%
N50369,279
Gap Ratio(%)0.0%
No. of Proteins1,823
No. of rRNA1
No. of tRNA50
No. of CRISPRS1
Coding Ratio(%)88.2%
Genome Coverage550.4X
Completeness98.71%
Contamination0.16%

Other Info.

Type StatusType Strain
Isolation Sourcecocoa bean heap fermentation
Instrument ModelIllumina HiSeq 2000
Release Date2014/02/27

Download Files

Genbank Flat File :
SRR1151197.gbk
GFF3-formatted File :
SRR1151197.gff
Genome Fasta File :
SRR1151197.genome.fna
Protein Fasta File :
SRR1151197.protein.faa
CDS Fasta File :
SRR1151197.cds.fna
RNA Fasta File :
SRR1151197.rna.fna
Feature Table :
SRR1151197.features.tsv
Genome Statistics :
SRR1151197.statistics.tsv

External Link

BioProject :
PRJNA222257
NCBI / EBI
BioSample :
SAMN02369439
NCBI / EBI
SRA :
SRR1151197
DDBJ / NCBI / EBI
Taxonomy ID :
1423729
NCBI / EBI
bacterio.net :
Lactobacillus cacaonum
Search at StrainInfo :
DSM 21116