[Note] Representative Genome of Lactobacillus plantarum subsp. plantarum

Genome Statistics

Total Length (bp)3,220,167
No. of Sequences19
GC Content(%)44.5%
N50495,034
Gap Ratio(%)0.001739%
No. of Proteins3,019
No. of rRNA4
No. of tRNA63
No. of CRISPRS0
Coding Ratio(%)84.2%
Genome Coverage267.3X
Completeness99.03%
Contamination1.53%

Other Info.

Type StatusType Strain
Isolation Sourcepickled cabbage
Instrument ModelIllumina HiSeq 2000
Release Date2014/02/26

Download Files

Genbank Flat File :
SRR1151193.gbk
GFF3-formatted File :
SRR1151193.gff
Genome Fasta File :
SRR1151193.genome.fna
Protein Fasta File :
SRR1151193.protein.faa
CDS Fasta File :
SRR1151193.cds.fna
RNA Fasta File :
SRR1151193.rna.fna
Feature Table :
SRR1151193.features.tsv
Genome Statistics :
SRR1151193.statistics.tsv

External Link

BioProject :
PRJNA222257
NCBI / EBI
BioSample :
SAMN02369435
NCBI / EBI
SRA :
SRR1151193
DDBJ / NCBI / EBI
Taxonomy ID :
525338
NCBI / EBI
bacterio.net :
Lactobacillus plantarum subsp. plantarum
Search at StrainInfo :
CGMCC 1.2437