Genome Statistics

Total Length (bp)1,974,273
No. of Sequences58
GC Content(%)41.0%
N50108,202
Gap Ratio(%)0.003596%
No. of Proteins1,982
No. of rRNA0
No. of tRNA47
No. of CRISPRS2
Coding Ratio(%)88.0%
Genome Coverage233.7X
Completeness98.71%
Contamination0.16%

Other Info.

Type StatusType Strain
Isolation Sourcefermented meat product
Instrument ModelIllumina HiSeq 2000
Release Date2014/02/26

Download Files

Genbank Flat File :
SRR1151188.gbk
GFF3-formatted File :
SRR1151188.gff
Genome Fasta File :
SRR1151188.genome.fna
Protein Fasta File :
SRR1151188.protein.faa
CDS Fasta File :
SRR1151188.cds.fna
RNA Fasta File :
SRR1151188.rna.fna
Feature Table :
SRR1151188.features.tsv
Genome Statistics :
SRR1151188.statistics.tsv

External Link

BioProject :
PRJNA222257
NCBI / EBI
BioSample :
SAMN02369430
NCBI / EBI
SRA :
SRR1151188
DDBJ / NCBI / EBI
Taxonomy ID :
525363
NCBI / EBI
bacterio.net :
Lactobacillus sakei subsp. carnosus
Search at StrainInfo :
DSM 15831