Genome Statistics

Total Length (bp)1,472,259
No. of Sequences30
GC Content(%)38.1%
N50169,180
Gap Ratio(%)0.014943%
No. of Proteins1,412
No. of rRNA2
No. of tRNA45
No. of CRISPRS0
Coding Ratio(%)88.4%
Genome Coverage128.1X
Completeness98.79%
Contamination0.59%

Other Info.

Type StatusType Strain
Isolation Sourceintestine
Instrument ModelIllumina HiSeq 2000
Release Date2014/02/27

Download Files

Genbank Flat File :
SRR1151181.gbk
GFF3-formatted File :
SRR1151181.gff
Genome Fasta File :
SRR1151181.genome.fna
Protein Fasta File :
SRR1151181.protein.faa
CDS Fasta File :
SRR1151181.cds.fna
RNA Fasta File :
SRR1151181.rna.fna
Feature Table :
SRR1151181.features.tsv
Genome Statistics :
SRR1151181.statistics.tsv

External Link

BioProject :
PRJNA222257
NCBI / EBI
BioSample :
SAMN02369423
NCBI / EBI
SRA :
SRR1151181
DDBJ / NCBI / EBI
Taxonomy ID :
1423820
NCBI / EBI
bacterio.net :
Lactobacillus aviarius subsp. araffinosus
Search at StrainInfo :
DSM 20653