[Note] Representative Genome of Lactobacillus vaginalis

Genome Statistics

Total Length (bp)1,781,526
No. of Sequences81
GC Content(%)40.5%
N5067,866
Gap Ratio(%)0.005052%
No. of Proteins1,733
No. of rRNA0
No. of tRNA58
No. of CRISPRS0
Coding Ratio(%)87.4%
Genome Coverage91.6X
Completeness99.35%
Contamination1.13%

Other Info.

Type StatusType Strain
Isolation Sourcevaginal swab from patient with trichomoniasis
Instrument ModelIllumina HiSeq 2000
Release Date2014/02/27

Download Files

Genbank Flat File :
SRR1151175.gbk
GFF3-formatted File :
SRR1151175.gff
Genome Fasta File :
SRR1151175.genome.fna
Protein Fasta File :
SRR1151175.protein.faa
CDS Fasta File :
SRR1151175.cds.fna
RNA Fasta File :
SRR1151175.rna.fna
Feature Table :
SRR1151175.features.tsv
Genome Statistics :
SRR1151175.statistics.tsv

External Link

BioProject :
PRJNA222257
NCBI / EBI
BioSample :
SAMN02369417
NCBI / EBI
SRA :
SRR1151175
DDBJ / NCBI / EBI
Taxonomy ID :
1423814
NCBI / EBI
bacterio.net :
Lactobacillus vaginalis
Search at StrainInfo :
DSM 5837