Genome Statistics

Total Length (bp)2,079,267
No. of Sequences51
GC Content(%)38.6%
N50153,294
Gap Ratio(%)0.0%
No. of Proteins2,021
No. of rRNA3
No. of tRNA41
No. of CRISPRS3
Coding Ratio(%)86.3%
Genome Coverage159.6X
Completeness99.3%
Contamination0.48%

Other Info.

Type StatusType Strain
Isolation Sourcefeces, wild Japanese wood mouse
Instrument ModelIllumina HiSeq 2000
Release Date2014/02/26

Download Files

Genbank Flat File :
SRR1151149.gbk
GFF3-formatted File :
SRR1151149.gff
Genome Fasta File :
SRR1151149.genome.fna
Protein Fasta File :
SRR1151149.protein.faa
CDS Fasta File :
SRR1151149.cds.fna
RNA Fasta File :
SRR1151149.rna.fna
Feature Table :
SRR1151149.features.tsv
Genome Statistics :
SRR1151149.statistics.tsv

External Link

BioProject :
PRJNA222257
NCBI / EBI
BioSample :
SAMN02369391
NCBI / EBI
SRA :
SRR1151149
DDBJ / NCBI / EBI
Taxonomy ID :
1423724
NCBI / EBI
bacterio.net :
Lactobacillus apodemi
Search at StrainInfo :
DSM 16634