Genome Statistics

Total Length (bp)2,854,844
No. of Sequences87
GC Content(%)42.9%
N5072,132
Gap Ratio(%)0.01296%
No. of Proteins2,644
No. of rRNA3
No. of tRNA36
No. of CRISPRS4
Coding Ratio(%)84.8%
Genome Coverage100.0X
Completeness98.71%
Contamination0.16%

Other Info.

Type StatusType Strain
Isolation Sourcenon-salted pickle solution used in production of sunki (Japanese traditional fermented leaves and stems of red turnips)
Instrument ModelIllumina MiSeq; Illumina HiSeq
Release Date2015/11/06

Download Files

Genbank Flat File :
GCA_001436255.1.gbk
GFF3-formatted File :
GCA_001436255.1.gff
Genome Fasta File :
GCA_001436255.1.genome.fna
Protein Fasta File :
GCA_001436255.1.protein.faa
CDS Fasta File :
GCA_001436255.1.cds.fna
RNA Fasta File :
GCA_001436255.1.rna.fna
Feature Table :
GCA_001436255.1.features.tsv
Genome Statistics :
GCA_001436255.1.statistics.tsv
Original Annotation :
Link to FTP server

External Link

BioProject :
PRJNA222257
NCBI / EBI
BioSample :
SAMN02369472
NCBI / EBI
NCBI Assembly :
GCA_001436255.1
Taxonomy ID :
1423795
NCBI / EBI
bacterio.net :
Lactobacillus rapi
Search at StrainInfo :
DSM 19907