Genome Statistics

Total Length (bp)1,556,969
No. of Sequences33
GC Content(%)43.6%
N50279,750
Gap Ratio(%)0.005588%
No. of Proteins1,561
No. of rRNA3
No. of tRNA51
No. of CRISPRS1
Coding Ratio(%)88.0%
Genome Coverage100.0X
Completeness98.06%
Contamination2.18%

Other Info.

Type StatusType Strain
Isolation Sourceswine waste-corn fermentation
Instrument ModelIllumina MiSeq; Illumina HiSeq
Release Date2015/11/06

Download Files

Genbank Flat File :
GCA_001436185.1.gbk
GFF3-formatted File :
GCA_001436185.1.gff
Genome Fasta File :
GCA_001436185.1.genome.fna
Protein Fasta File :
GCA_001436185.1.protein.faa
CDS Fasta File :
GCA_001436185.1.cds.fna
RNA Fasta File :
GCA_001436185.1.rna.fna
Feature Table :
GCA_001436185.1.features.tsv
Genome Statistics :
GCA_001436185.1.statistics.tsv
Original Annotation :
Link to FTP server

External Link

BioProject :
PRJNA222257
NCBI / EBI
BioSample :
SAMN02369500
NCBI / EBI
NCBI Assembly :
GCA_001436185.1
Taxonomy ID :
1423721
NCBI / EBI
bacterio.net :
Lactobacillus amylophilus
Search at StrainInfo :
DSM 20533