[Note] Representative Genome of Lactobacillus collinoides

Genome Statistics

Total Length (bp)3,616,190
No. of Sequences130
GC Content(%)46.1%
N5091,765
Gap Ratio(%)0.02392%
No. of Proteins3,224
No. of rRNA3
No. of tRNA50
No. of CRISPRS3
Coding Ratio(%)80.5%
Genome Coverage100.0X
Completeness99.03%
Contamination1.34%

Other Info.

Type StatusType Strain
Isolation Sourcefermenting apple juice
Instrument ModelIllumina MiSeq; Illumina HiSeq
Release Date2015/11/06

Download Files

Genbank Flat File :
GCA_001435975.1.gbk
GFF3-formatted File :
GCA_001435975.1.gff
Genome Fasta File :
GCA_001435975.1.genome.fna
Protein Fasta File :
GCA_001435975.1.protein.faa
CDS Fasta File :
GCA_001435975.1.cds.fna
RNA Fasta File :
GCA_001435975.1.rna.fna
Feature Table :
GCA_001435975.1.features.tsv
Genome Statistics :
GCA_001435975.1.statistics.tsv
Original Annotation :
Link to FTP server

External Link

BioProject :
PRJNA222257
NCBI / EBI
BioSample :
SAMN02369441
NCBI / EBI
NCBI Assembly :
GCA_001435975.1
Taxonomy ID :
1423733
NCBI / EBI
bacterio.net :
Lactobacillus collinoides
Search at StrainInfo :
DSM 20515