Genome Statistics

Total Length (bp)1,787,468
No. of Sequences149
GC Content(%)40.5%
N5030,329
Gap Ratio(%)0.013035%
No. of Proteins1,738
No. of rRNA3
No. of tRNA24
No. of CRISPRS0
Coding Ratio(%)87.4%
Genome Coverage100.0X
Completeness99.35%
Contamination1.13%

Other Info.

Type StatusType Strain
Isolation Sourcevaginal swab from patient with trichomoniasis
Instrument ModelIllumina MiSeq; Illumina HiSeq
Release Date2015/11/06

Download Files

Genbank Flat File :
GCA_001435915.1.gbk
GFF3-formatted File :
GCA_001435915.1.gff
Genome Fasta File :
GCA_001435915.1.genome.fna
Protein Fasta File :
GCA_001435915.1.protein.faa
CDS Fasta File :
GCA_001435915.1.cds.fna
RNA Fasta File :
GCA_001435915.1.rna.fna
Feature Table :
GCA_001435915.1.features.tsv
Genome Statistics :
GCA_001435915.1.statistics.tsv
Original Annotation :
Link to FTP server

External Link

BioProject :
PRJNA222257
NCBI / EBI
BioSample :
SAMN02369417
NCBI / EBI
NCBI Assembly :
GCA_001435915.1
Taxonomy ID :
1423814
NCBI / EBI
bacterio.net :
Lactobacillus vaginalis
Search at StrainInfo :
DSM 5837