Genome Statistics

Total Length (bp)1,475,258
No. of Sequences31
GC Content(%)38.1%
N50115,444
Gap Ratio(%)0.009693%
No. of Proteins1,414
No. of rRNA3
No. of tRNA23
No. of CRISPRS0
Coding Ratio(%)88.2%
Genome Coverage100.0X
Completeness98.79%
Contamination0.59%

Other Info.

Type StatusType Strain
Isolation Sourceintestine
Instrument ModelIllumina MiSeq; Illumina HiSeq
Release Date2015/11/06

Download Files

Genbank Flat File :
GCA_001435375.1.gbk
GFF3-formatted File :
GCA_001435375.1.gff
Genome Fasta File :
GCA_001435375.1.genome.fna
Protein Fasta File :
GCA_001435375.1.protein.faa
CDS Fasta File :
GCA_001435375.1.cds.fna
RNA Fasta File :
GCA_001435375.1.rna.fna
Feature Table :
GCA_001435375.1.features.tsv
Genome Statistics :
GCA_001435375.1.statistics.tsv
Original Annotation :
Link to FTP server

External Link

BioProject :
PRJNA222257
NCBI / EBI
BioSample :
SAMN02369423
NCBI / EBI
NCBI Assembly :
GCA_001435375.1
Taxonomy ID :
1423820
NCBI / EBI
bacterio.net :
Lactobacillus aviarius subsp. araffinosus
Search at StrainInfo :
DSM 20653