Genome Statistics

Total Length (bp)2,335,811
No. of Sequences67
GC Content(%)38.1%
N5071,426
Gap Ratio(%)0.0%
No. of Proteins3,490
No. of rRNA3
No. of tRNA52
No. of CRISPRS1
Coding Ratio(%)83.6%
Genome Coverage33.0X
Completeness93.87%
Contamination4.8%

Other Info.

Type StatusType Strain
Isolation Source
Instrument ModelIon PGM
Release Date2015/10/01

Download Files

Genbank Flat File :
GCA_001311505.1.gbk
GFF3-formatted File :
GCA_001311505.1.gff
Genome Fasta File :
GCA_001311505.1.genome.fna
Protein Fasta File :
GCA_001311505.1.protein.faa
CDS Fasta File :
GCA_001311505.1.cds.fna
RNA Fasta File :
GCA_001311505.1.rna.fna
Feature Table :
GCA_001311505.1.features.tsv
Genome Statistics :
GCA_001311505.1.statistics.tsv
Original Annotation :
Link to FTP server

External Link

BioProject :
PRJDB780
DDBJ / NCBI / EBI
BioSample :
SAMD00000460
DDBJ / NCBI / EBI
NCBI Assembly :
GCA_001311505.1
Taxonomy ID :
1291742
NCBI / EBI
bacterio.net :
Lactobacillus hokkaidonensis
Search at StrainInfo :
JCM 18461