Genome Statistics

Total Length (bp)3,716,548
No. of Sequences19
GC Content(%)46.2%
N50620,519
Gap Ratio(%)0.00748%
No. of Proteins3,357
No. of rRNA7
No. of tRNA40
No. of CRISPRS7
Coding Ratio(%)81.2%
Genome Coverage600.0X
Completeness99.35%
Contamination2.0%

Other Info.

Type Statusnon-type strain
Isolation SourceTemperate decuduous forest biome soil
Instrument ModelIllumina HiSeq
Release Date2015/07/30

Download Files

Genbank Flat File :
GCA_001188985.1.gbk
GFF3-formatted File :
GCA_001188985.1.gff
Genome Fasta File :
GCA_001188985.1.genome.fna
Protein Fasta File :
GCA_001188985.1.protein.faa
CDS Fasta File :
GCA_001188985.1.cds.fna
RNA Fasta File :
GCA_001188985.1.rna.fna
Feature Table :
GCA_001188985.1.features.tsv
Genome Statistics :
GCA_001188985.1.statistics.tsv
Original Annotation :
Link to FTP server

External Link

BioProject :
PRJNA287739
NCBI / EBI
BioSample :
SAMN03785590
NCBI / EBI
NCBI Assembly :
GCA_001188985.1
Taxonomy ID :
1589
NCBI / EBI
bacterio.net :
Lactobacillus pentosus
Search at StrainInfo :
FL0421