[Note] Representative Genome of Lactobacillus herbarum

Genome Statistics

Total Length (bp)2,899,876
No. of Sequences55
GC Content(%)43.5%
N50118,101
Gap Ratio(%)0.123143%
No. of Proteins2,805
No. of rRNA4
No. of tRNA36
No. of CRISPRS0
Coding Ratio(%)84.4%
Genome Coverage413.0X
Completeness99.24%
Contamination2.5%

Other Info.

Type StatusType Strain
Isolation Sourcefermented radish
Instrument ModelIllumina HiSeq
Release Date2015/06/24

Download Files

Genbank Flat File :
GCA_001039045.1.gbk
GFF3-formatted File :
GCA_001039045.1.gff
Genome Fasta File :
GCA_001039045.1.genome.fna
Protein Fasta File :
GCA_001039045.1.protein.faa
CDS Fasta File :
GCA_001039045.1.cds.fna
RNA Fasta File :
GCA_001039045.1.rna.fna
Feature Table :
GCA_001039045.1.features.tsv
Genome Statistics :
GCA_001039045.1.statistics.tsv
Original Annotation :
Link to FTP server

External Link

BioProject :
PRJNA286806
NCBI / EBI
BioSample :
SAMN03770836
NCBI / EBI
NCBI Assembly :
GCA_001039045.1
Taxonomy ID :
1670446
NCBI / EBI
bacterio.net :
Lactobacillus herbarum
Search at StrainInfo :
TCF032-E4