[Note] Shows 96.8% ANI value against L. zeae DSM 20178T and 94.3% against L. casei ATCC 393T.

Genome Statistics

Total Length (bp)3,001,027
No. of Sequences26
GC Content(%)47.9%
N50737,422
Gap Ratio(%)0.0%
No. of Proteins2,795
No. of rRNA7
No. of tRNA50
No. of CRISPRS3
Coding Ratio(%)85.3%
Genome Coverage586.0X
Completeness99.35%
Contamination0.27%

Other Info.

Type Statusnon-type strain
Isolation SourceInfant feces
Instrument ModelIllumina HiSeq
Release Date2015/05/26

Download Files

Genbank Flat File :
GCA_001013375.1.gbk
GFF3-formatted File :
GCA_001013375.1.gff
Genome Fasta File :
GCA_001013375.1.genome.fna
Protein Fasta File :
GCA_001013375.1.protein.faa
CDS Fasta File :
GCA_001013375.1.cds.fna
RNA Fasta File :
GCA_001013375.1.rna.fna
Feature Table :
GCA_001013375.1.features.tsv
Genome Statistics :
GCA_001013375.1.statistics.tsv
Original Annotation :
Link to FTP server

External Link

BioProject :
PRJNA282947
NCBI / EBI
BioSample :
SAMN03580836
NCBI / EBI
NCBI Assembly :
GCA_001013375.1
Taxonomy ID :
1582
NCBI / EBI
bacterio.net :
Lactobacillus casei
Search at StrainInfo :
N87