Genome Statistics

Total Length (bp)3,353,072
No. of Sequences52
GC Content(%)44.4%
N50256,293
Gap Ratio(%)8.9e-05%
No. of Proteins3,224
No. of rRNA16
No. of tRNA66
No. of CRISPRS1
Coding Ratio(%)83.0%
Genome Coverage250.0X
Completeness99.35%
Contamination2.5%

Other Info.

Type Statusnon-type strain
Isolation Sourcedairy products
Instrument ModelIllumina HiSeq
Release Date2015/04/01

Download Files

Genbank Flat File :
GCA_000966475.1.gbk
GFF3-formatted File :
GCA_000966475.1.gff
Genome Fasta File :
GCA_000966475.1.genome.fna
Protein Fasta File :
GCA_000966475.1.protein.faa
CDS Fasta File :
GCA_000966475.1.cds.fna
RNA Fasta File :
GCA_000966475.1.rna.fna
Feature Table :
GCA_000966475.1.features.tsv
Genome Statistics :
GCA_000966475.1.statistics.tsv
Original Annotation :
Link to FTP server

External Link

BioProject :
PRJNA277393
NCBI / EBI
BioSample :
SAMN03390058
NCBI / EBI
NCBI Assembly :
GCA_000966475.1
Taxonomy ID :
1590
NCBI / EBI
bacterio.net :
Lactobacillus plantarum
Search at StrainInfo :
NL42