Genome Statistics

Total Length (bp)1,949,539
No. of Sequences17
GC Content(%)38.5%
N50190,607
Gap Ratio(%)5.1e-05%
No. of Proteins1,993
No. of rRNA3
No. of tRNA40
No. of CRISPRS0
Coding Ratio(%)87.8%
Genome Coverage150.0X
Completeness99.3%
Contamination0.16%

Other Info.

Type Statusnon-type strain
Isolation SourceType II sourdough
Instrument ModelIllumina HiSeq; PacBio
Release Date2015/08/18

Download Files

Genbank Flat File :
GCA_000712565.2.gbk
GFF3-formatted File :
GCA_000712565.2.gff
Genome Fasta File :
GCA_000712565.2.genome.fna
Protein Fasta File :
GCA_000712565.2.protein.faa
CDS Fasta File :
GCA_000712565.2.cds.fna
RNA Fasta File :
GCA_000712565.2.rna.fna
Feature Table :
GCA_000712565.2.features.tsv
Genome Statistics :
GCA_000712565.2.statistics.tsv
Original Annotation :
Link to FTP server

External Link

BioProject :
PRJNA248653
NCBI / EBI
BioSample :
SAMN02869563
NCBI / EBI
NCBI Assembly :
GCA_000712565.2
Taxonomy ID :
1598
NCBI / EBI
bacterio.net :
Lactobacillus reuteri
Search at StrainInfo :
TMW1.656