Genome Statistics

Total Length (bp)2,030,219
No. of Sequences38
GC Content(%)40.9%
N50111,457
Gap Ratio(%)0.0%
No. of Proteins1,964
No. of rRNA3
No. of tRNA26
No. of CRISPRS0
Coding Ratio(%)88.4%
Genome Coverage500.0X
Completeness98.71%
Contamination0.16%

Other Info.

Type Statusnon-type strain
Isolation Source
Instrument ModelIllumina
Release Date2013/05/29

Download Files

Genbank Flat File :
GCA_000478625.2.gbk
GFF3-formatted File :
GCA_000478625.2.gff
Genome Fasta File :
GCA_000478625.2.genome.fna
Protein Fasta File :
GCA_000478625.2.protein.faa
CDS Fasta File :
GCA_000478625.2.cds.fna
RNA Fasta File :
GCA_000478625.2.rna.fna
Feature Table :
GCA_000478625.2.features.tsv
Genome Statistics :
GCA_000478625.2.statistics.tsv
Original Annotation :
Link to FTP server

External Link

BioProject :
PRJNA186903
NCBI / EBI
BioSample :
SAMN02178497
NCBI / EBI
NCBI Assembly :
GCA_000478625.2
Taxonomy ID :
1285582
NCBI / EBI
bacterio.net :
Lactobacillus sakei subsp. sakei
Search at StrainInfo :
LS25