[Note] Representative Genome of Lactobacillus secaliphilus

Genome Statistics

Total Length (bp)1,646,143
No. of Sequences11
GC Content(%)47.7%
N50286,054
Gap Ratio(%)0.00243%
No. of Proteins1,503
No. of rRNA2
No. of tRNA39
No. of CRISPRS0
Coding Ratio(%)89.0%
Genome Coverage100.0X
Completeness97.58%
Contamination0.48%

Other Info.

Type StatusType Strain
Isolation Sourcetype II sourdough fermentation
Instrument ModelIllumina MiSeq; Illumina HiSeq
Release Date2015/11/06

Download Files

Genbank Flat File :
GCA_001437055.1.gbk
GFF3-formatted File :
GCA_001437055.1.gff
Genome Fasta File :
GCA_001437055.1.genome.fna
Protein Fasta File :
GCA_001437055.1.protein.faa
CDS Fasta File :
GCA_001437055.1.cds.fna
RNA Fasta File :
GCA_001437055.1.rna.fna
Feature Table :
GCA_001437055.1.features.tsv
Genome Statistics :
GCA_001437055.1.statistics.tsv
Original Annotation :
Link to FTP server

External Link

BioProject :
PRJNA222257
NCBI / EBI
BioSample :
SAMN02797776
NCBI / EBI
NCBI Assembly :
GCA_001437055.1
Taxonomy ID :
396268
NCBI / EBI
bacterio.net :
Lactobacillus secaliphilus
Search at StrainInfo :
DSM 17896