Genome Statistics

Total Length (bp)1,680,526
No. of Sequences24
GC Content(%)40.1%
N50210,033
Gap Ratio(%)0.024933%
No. of Proteins1,585
No. of rRNA3
No. of tRNA37
No. of CRISPRS0
Coding Ratio(%)88.8%
Genome Coverage100.0X
Completeness99.11%
Contamination1.56%

Other Info.

Type StatusType Strain
Isolation Sourcefeces
Instrument ModelIllumina MiSeq; Illumina HiSeq
Release Date2015/11/06

Download Files

Genbank Flat File :
GCA_001436315.1.gbk
GFF3-formatted File :
GCA_001436315.1.gff
Genome Fasta File :
GCA_001436315.1.genome.fna
Protein Fasta File :
GCA_001436315.1.protein.faa
CDS Fasta File :
GCA_001436315.1.cds.fna
RNA Fasta File :
GCA_001436315.1.rna.fna
Feature Table :
GCA_001436315.1.features.tsv
Genome Statistics :
GCA_001436315.1.statistics.tsv
Original Annotation :
Link to FTP server

External Link

BioProject :
PRJNA222257
NCBI / EBI
BioSample :
SAMN02369392
NCBI / EBI
NCBI Assembly :
GCA_001436315.1
Taxonomy ID :
1423821
NCBI / EBI
bacterio.net :
Lactobacillus aviarius subsp. aviarius
Search at StrainInfo :
DSM 20655