Genome Statistics

Total Length (bp)2,232,918
No. of Sequences61
GC Content(%)37.6%
N50110,492
Gap Ratio(%)0.018944%
No. of Proteins2,102
No. of rRNA2
No. of tRNA42
No. of CRISPRS2
Coding Ratio(%)85.3%
Genome Coverage100.0X
Completeness99.03%
Contamination1.34%

Other Info.

Type StatusType Strain
Isolation Sourceisolated from fermented brine used for stinky tofu production
Instrument ModelIllumina MiSeq; Illumina HiSeq
Release Date2015/11/06

Download Files

Genbank Flat File :
GCA_001434915.1.gbk
GFF3-formatted File :
GCA_001434915.1.gff
Genome Fasta File :
GCA_001434915.1.genome.fna
Protein Fasta File :
GCA_001434915.1.protein.faa
CDS Fasta File :
GCA_001434915.1.cds.fna
RNA Fasta File :
GCA_001434915.1.rna.fna
Feature Table :
GCA_001434915.1.features.tsv
Genome Statistics :
GCA_001434915.1.statistics.tsv
Original Annotation :
Link to FTP server

External Link

BioProject :
PRJNA222257
NCBI / EBI
BioSample :
SAMN02369440
NCBI / EBI
NCBI Assembly :
GCA_001434915.1
Taxonomy ID :
1423731
NCBI / EBI
bacterio.net :
Lactobacillus capillatus
Search at StrainInfo :
DSM 19910