Genome Statistics

Total Length (bp)2,091,181
No. of Sequences54
GC Content(%)38.6%
N50164,516
Gap Ratio(%)0.022714%
No. of Proteins2,032
No. of rRNA4
No. of tRNA49
No. of CRISPRS3
Coding Ratio(%)86.2%
Genome Coverage100.0X
Completeness99.3%
Contamination0.48%

Other Info.

Type StatusType Strain
Isolation Sourcefeces, wild Japanese wood mouse
Instrument ModelIllumina MiSeq; Illumina HiSeq
Release Date2015/11/06

Download Files

Genbank Flat File :
GCA_001434405.1.gbk
GFF3-formatted File :
GCA_001434405.1.gff
Genome Fasta File :
GCA_001434405.1.genome.fna
Protein Fasta File :
GCA_001434405.1.protein.faa
CDS Fasta File :
GCA_001434405.1.cds.fna
RNA Fasta File :
GCA_001434405.1.rna.fna
Feature Table :
GCA_001434405.1.features.tsv
Genome Statistics :
GCA_001434405.1.statistics.tsv
Original Annotation :
Link to FTP server

External Link

BioProject :
PRJNA222257
NCBI / EBI
BioSample :
SAMN02369391
NCBI / EBI
NCBI Assembly :
GCA_001434405.1
Taxonomy ID :
1423724
NCBI / EBI
bacterio.net :
Lactobacillus apodemi
Search at StrainInfo :
DSM 16634