Genome Statistics

Total Length (bp)3,325,806
No. of Sequences11
GC Content(%)44.4%
N502,312,345
Gap Ratio(%)0.016537%
No. of Proteins3,084
No. of rRNA11
No. of tRNA70
No. of CRISPRS0
Coding Ratio(%)84.0%
Genome Coverage200.0X
Completeness99.03%
Contamination1.96%

Other Info.

Type Statusnon-type strain
Isolation Sourcefu-tsai (a Taiwan fermented mustard product)
Instrument ModelIllumina MiSeq; PacBio
Release Date2015/05/11

Download Files

Genbank Flat File :
GCA_001005805.1.gbk
GFF3-formatted File :
GCA_001005805.1.gff
Genome Fasta File :
GCA_001005805.1.genome.fna
Protein Fasta File :
GCA_001005805.1.protein.faa
CDS Fasta File :
GCA_001005805.1.cds.fna
RNA Fasta File :
GCA_001005805.1.rna.fna
Feature Table :
GCA_001005805.1.features.tsv
Genome Statistics :
GCA_001005805.1.statistics.tsv
Original Annotation :
Link to FTP server

External Link

BioProject :
PRJNA279324
NCBI / EBI
BioSample :
SAMN03445817
NCBI / EBI
NCBI Assembly :
GCA_001005805.1
Taxonomy ID :
1590
NCBI / EBI
bacterio.net :
Lactobacillus plantarum
Search at StrainInfo :
PS128